ENH: Allow afni.MaskTool to take multiple input files #2892
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1 task
effigies
approved these changes
Feb 25, 2019
effigies
changed the title
Codecov Report
@@ Coverage Diff @@
## master #2892 +/- ##
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+ Coverage 67.49% 67.68% +0.18%
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Files 343 343
Lines 43598 44327 +729
Branches 5426 5664 +238
==========================================
+ Hits 29427 30002 +575
- Misses 13467 13605 +138
- Partials 704 720 +16
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yarikoptic
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Mar 15, 2019
1.1.9 (February 25, 2019) Full changelog: https://github.com/nipy/nipype/milestone/30?closed=1 * FIX: Make positional arguments to LaplacianThickness require previous argument (nipy#2848) * FIX: Import math and csv modules for bids_gen_info (nipy#2881) * FIX: Ensure outputs can be listed in camino.ProcStreamlines by defining instance variable (nipy#2739) * ENH: Allow afni.MaskTool to take multiple input files (nipy#2892) * ENH: Add flags dictionary input to spm.Level1Design (nipy#2861) * ENH: Threshold stddev once only in TSNR (nipy#2883) * ENH: Add workbench.CiftiSmooth interface (nipy#2871) * DOC: Replace initialism typo in comment with intended phrase (nipy#2875) * DOC: Fix typos in ANTs Registration input documentation (nipy#2869) * tag '1.1.9': (34 commits) MNT: Update changelog MNT: Add Katherine Bottenhorn, Paul Mihai to Zenodo MNT: Add kchawla-pi to Zenodo, update mailmap and ordering add to zenodo MNT: Update zenodo ordering Update .zenodo.json afni utils.py - masktool - InputMultiPath for in_file argument MNT: Update .zenodo ordering MNT: Add Oliver Contier name to .zenodo.json Update nipype/interfaces/spm/model.py ENH: Add zenodo updating script MNT: Update mailmap to avoid renames in script MNT: Update .mailmap, .zenodo.json MNT: Version 1.1.9 DOC: 1.1.9 changelog ENH: minor - compute non degenerate stddev map once BF: regenerated test_auto_LaplacianThickness using wonderfully long running tools/checkspecs.py TEST: Thorough test of LaplacianThickness requirement cascade FIX: Requires error text was backwards import math and csv modules for bids_gen_info ...
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Summary
Fixes #2874. its a follow up from #2886 where PR was accidentally closed.
List of changes proposed in this PR (pull-request)
Made a change to the inputs of
MaskToolclass in AFNI interface. UsedInputMultiObjectas suggested, tested it out and now it works fine with multiple input images as well as far as I can tell.Acknowledgment