kchu25 / MOTIFs.jl Star 7 Code Issues Pull requests DNA Motif discovery that includes the discovery of flexible (long or gapped) motifs. bioinformatics machine-learning-algorithms representation-learning dna-sequences motifs transcription-factor-binding-site Updated Jan 18, 2024 Julia
kchu25 / MotifPvalue.jl Star 2 Code Issues Pull requests Threshold and p-value computations for Position Weight Matrices bioinformatics genomics julia motif p-value transcription-factor-binding pwm motifs position-weight-matrix regulatory-genomics Updated Dec 15, 2021 Julia
chaolinzhanglab / PlotPWM.jl Star 1 Code Issues Pull requests Plot position weight matrices (PWM) dna rna protein-rna-interactions binding-sites motifs protein-dna-interactions rna-binding-proteins tfbs transcription-factor-binding-site position-weight-matrix Updated Mar 13, 2025 Julia
kchu25 / SeqLogo.jl Star 0 Code Issues Pull requests Plot position weight matrices (PWM) dna rna pwm protein-rna-interactions binding-sites motifs protein-dna-interactions rna-binding-proteins tfbs position-weight-matrix transcription-factor-binding-sites Updated Nov 18, 2024 Julia