Thermo scientific 96 1200ul rd integration (#135)

* ThermoScientific_96_1200ul_Rd integration

* adding docstring with useful information in the field

* fixing linting

Author: BioCam

pylabrobot/resources/thermo_fisher/README.md

@@ -1,5 +1,19 @@
 # Resource definitions: Thermo Fisher
 
+Company page: [Thermo Fisher Scientific Wikipedia](https://en.wikipedia.org/wiki/Thermo_Fisher_Scientific)
+
+> Thermo Fisher Scientific Inc. is an American supplier of analytical instruments, life sciences solutions, specialty diagnostics, laboratory, pharmaceutical and biotechnology services. Based in Waltham, Massachusetts, Thermo Fisher was formed through the **merger of Thermo Electron and Fisher Scientific in 2006**. Thermo Fisher Scientific has acquired other reagent, consumable, instrumentation, and service providers, including Life Technologies Corporation (2013), Alfa Aesar (2015), Affymetrix (2016), FEI Company (2016), BD Advanced Bioprocessing (2018),and PPD (2021).
+
+> As of 2023, the company had a market capitalization of $202 billion. It ranked 97th on the Fortune 500 list based on its 2022 annual revenue of US$44.92 billion.
+
+
+## Plates
+
+| Description               | Image              | PLR definition |
+|--------------------|--------------------|--------------------|
+| 'ThermoScientific_96_1200ul_Rd'<br>Part no.: AB-1127 or 10243223<br>[manufacturer website](https://www.fishersci.co.uk/shop/products/product/10243223) | <img src="imgs/ThermoScientific_96_1200ul_Rd.webp" alt="ThermoScientific_96_1200ul_Rd" width="250"/> | `ThermoScientific_96_1200ul_Rd` |
+
+
 ## Troughs
 
 | Description               | Image              | PLR definition |

pylabrobot/resources/thermo_fisher/__init__.py

@@ -1 +1,2 @@
+from .plates import *
 from .troughs import *

pylabrobot/resources/thermo_fisher/imgs/ThermoScientific_96_1200ul_Rd.webp

@@ -0,0 +1,69 @@
+""" Thermo Fisher & Thermo Fisher Scientific plates """
+
+# pylint: disable=invalid-name
+
+from pylabrobot.resources.well import Well, WellBottomType, CrossSectionType
+from pylabrobot.resources.itemized_resource import create_equally_spaced
+from pylabrobot.resources.plate import Plate
+
+from pylabrobot.resources.volume_functions import calculate_liquid_volume_container_2segments_square_ubottom
+
+
+def _compute_volume_from_height_ThermoScientific_96_1200ul_Rd(h: float):
+  if h > 20.5:
+    raise ValueError(f"Height {h} is too large for ThermoScientific_96_1200ul_Rd")
+  return calculate_liquid_volume_container_2segments_square_ubottom(
+    x=8.15,
+    h_cuboid=16.45,
+    liquid_height=h)
+
+
+#: ThermoScientific_96_1200ul_Rd
+def ThermoScientific_96_1200ul_Rd(name: str, with_lid: bool = False) -> Plate:
+  """ Fisher Scientific/Thermo Fisher cat. no.: 10243223/AB1127.
+  - Material: Polypropylene (AB-1068, polystyrene)
+  - Suitable for Autoclaving (15 minutes at 121°C) or Gamma Irradiation
+  - Resistant to DMSO (100%); Ethanol (100%); Isopropanol (100%)
+  - Round well shape designed for optimal sample recovery or square shape to
+    maximize sample volume within ANSI footprint design
+  - Each well has an independent sealing rim to prevent cross-contamination
+  - U-bottomed wells ideally suited for sample resuspension
+  - Sealing options: Adhesive Seals, Heat Seals, Storage Plate Caps and Cap
+    Strips, and Storage Plate Sealing Mats
+  - Cleanroom manufactured
+  - ANSI-format for compatibility with automated systems
+  """
+  return Plate(
+    name=name,
+    size_x=127.0,
+    size_y=86.0,
+    size_z=24.0,
+    with_lid=with_lid,
+    model="ThermoScientific_96_1200ul_Rd",
+    lid_height=5,
+    items=create_equally_spaced(Well,
+      num_items_x=12,
+      num_items_y=8,
+      dx=9.6,
+      dy=7.3,
+      dz=0.2,
+      item_dx=9,
+      item_dy=9,
+      size_x=8.3,
+      size_y=8.3,
+      size_z=20.5,
+      bottom_type=WellBottomType.U,
+      compute_volume_from_height=_compute_volume_from_height_ThermoScientific_96_1200ul_Rd,
+      cross_section_type=CrossSectionType.RECTANGLE
+    ),
+  )
+
+
+#: ThermoScientific_96_1200ul_Rd_L
+def ThermoScientific_96_1200ul_Rd_L(name: str, with_lid: bool = False) -> Plate:
+  return ThermoScientific_96_1200ul_Rd(name=name, with_lid=with_lid)
+
+
+#: ThermoScientific_96_1200ul_Rd_P
+def ThermoScientific_96_1200ul_Rd_P(name: str, with_lid: bool = False) -> Plate:
+  return ThermoScientific_96_1200ul_Rd(name=name, with_lid=with_lid).rotated(90)